Original Resources
Our Lab Page	Laboratory for Phyloinformatics, RIKEN BDR
aLeaves	Gateway for building zoologically informative phylogenetic trees
Squalomix	Elasmobranch sequence archive
Reptiliomix	Sequence resources of reptiles
gVolante	Completeness assessment of genome/transcriptome sequences
Useful tools
CEGMA	Core Eukaryotic Genes Mapping Approach
BUSCO	Assessing genome assembly and annotation completeness
Augustus	Gene prediction program for eukaryotes
GeneWise	Compares a protein sequence to a genomic DNA sequence
HMMER	Identify homologous sequences using profile of hidden Markov Models
NCBI CDD	Protein annotation resource that consists of multiple sequence alignments
Ortholog Database
CVG	Dataset of one-to-one vertebrate core ortholog groups
OrthoDB	Database of orthologous genes from eukaryotic species
EggNOG	A hierarchical orthology framework with improved functional annotations
NCBI KOG	Clusters of orthologous groups from 7 eukaryotic complete genomes